Cambio - Excellence in Molecular Biology

Enzymes for Molecular Biology

Enzymes for Molecular Biology: Enzymes for Molecular Biology

Agarose Gel-Digesting enzyme

Agarose Gel-Digesting Preparation is a unique enzyme solution developed for simple, quantitative recovery of intact DNA and RNA from low melting point (LMP) agarose gels following electrophoresis in TAE, TBE, MOPS, or phosphate buffers

Cambio

Description

Your Replacement for Gelase™ Gel digestion enzyme is here!

Cambio Agarose Gel-Digesting Enzyme is a unique enzyme solution developed for simple, quantitative recovery of intact DNA and RNA from low melting point (LMP) agarose gels following electrophoresis in TAE, TBE, MOPS, or phosphate buffers. This product is an agarase derived from a heat-resistant microorganism found  in the deep oceans. It has excellent heat resistance compared to conventional agarase.

Agarose Gel-Digesting Enzyme digests the carbohydrate backbone of molten agarose into small, soluble oligosaccharides (neoagaro-oligosaccharides). While the agarose solution after the degradation does not form a gel again. This property allows Agarase to be used for extracting nucleic acid from agarose gels.

The advantages of nucleic acid extraction by Agarose Gel Digesting Enzyme include the  following:

  • Simple Protocol
  • Non -hazardous reagents
  • Low melting point agarose compatible
  • Relatively large DNA fragments can be recovered without damage.
  • Suitable for gels made with TAE, TBE, MOPS, or phosphate buffers
  • Extremely stable at -20°C, 4°C and ambient for long periods
  • Retains 100% activity after >120 Freeze thaw cycle

___________________________________________________________________________________


Composition
Thermostable β-Agarase (30 units / 300 units)× 1 Vial

Activity  
1 unit/ μl

Storage Conditions
50 mM NaCl, 20 mM Tris-HCl (pH 7.5)

Definition of Units
One  unit  is  defined  as  an  enzyme  activity  that  produces  reducing
sugar equivalent amount of 1 μmol D-galactose from agarose gel per
1 min at 60°C.

If you cannot find the answer to your problem then please contact us or telephone +44 (0)1954 210 200

References

References using original GELase (now replaced by Agarose Gel Digesting Enzyme)

  1. Kirkpatrick, H.A. et al. (1997) EPICENTRE Forum 4 (3), 11.
  2. Sasaki, H. and Hogan, B.L.M. (1994) Cell 76, 103.
  3. Schedl, A. et al. (1993) Nature 362, 258.
  4. Woo, S.S. et al. (1994) Nucl. Acids Res. 22, 4922.
  5. Steck, T.R. (1994) BioTechniques 17, 676.
  6. Chen, L. et al. (1994) BioTechniques 16, 228
  7. Hurt, J. K., et al. (2010) High-Throughput Screening of the Virulence Regulator VirF: A Novel Antibacterial Target for Shigellosis, J Biomol Screen 15 , 379-387.
  8. Schultz, S. S., et al. (2010) Single-Molecule Analysis Reveals Changes in the DNA Replication Program for the POU5F1 Locus upon Human Embryonic Stem Cell Differentiation, Mol. Cell. Biol. 30 , 4521-4534.
  9. Yoshida, S., et al. (2010) Gene expression profile of fibrovascular membranes from patients with proliferative diabetic retinopathy, Br J Ophthalmol 94 , 795-801.
  10. Liles, M. R., et al. (2009) Isolation and Cloning of High-Molecular-Weight Metagenomic DNA from Soil Microorganisms, Cold Spring Harb Protoc 2009 , pdb.prot5271-.
  11. Sul, W. J., et al. (2009) DNA-Stable Isotope Probing Integrated with Metagenomics for Retrieval of Biphenyl Dioxygenase Genes from Polychlorinated Biphenyl-Contaminated River Sediment, Appl. Envir. Microbiol. 75 , 5501-5506.
  12. de Bruijn, I., et al. (2008) Massetolide A Biosynthesis in Pseudomonas fluorescens, J. Bacteriol. 190 , 2777-2789.
  13. Huhndorf, S. M., et al. (2008) Two new genera in the Magnaporthaceae, a new addition to Ceratosphaeria and two new species of Lentomitella, Mycologia 100 , 940-955.
  14. Liles, M. R., et al. (2008) Recovery, Purification, and Cloning of High-Molecular-Weight DNA from Soil Microorganisms, Appl. Envir. Microbiol. 74 , 3302-3305.
  15. Nakhamchik, A., et al. (2008) Cyclic-di-GMP Regulates Extracellular Polysaccharide Production, Biofilm Formation, and Rugose Colony Development by Vibrio vulnificus, Appl. Envir. Microbiol. 74 , 4199-4209.
  16. Cheng, D.-s., et al. (2007) Airway Epithelium Controls Lung Inflammation and Injury through the NF-{kappa}B Pathway, J. Immunol. 178 , 6504-6513.
  17. Chow, V., et al. (2007) Structure, Function, and Regulation of the Aldouronate Utilization Gene Cluster from Paenibacillus sp. Strain JDR-2, J. Bacteriol. 189 , 8863-8870.
  18. Hiroki, T., et al. (2007) An Intronic Locus Control Region Plays an Essential Role in the Establishment of an Autonomous Hepatic Chromatin Domain for the Human Vitamin D-Binding Protein Gene, Mol. Cell. Biol. 27 , 7365-7380.
  19. Everhart, M. B., et al. (2006) Duration and Intensity of NF-{kappa}B Activity Determine the Severity of Endotoxin-Induced Acute Lung Injury, J. Immunol. 176 , 4995-5005.
  20. Frutos, R., et al. (2006) Comparative Genomic Analysis of Three Strains of Ehrlichia ruminantium Reveals an Active Process of Genome Size Plasticity, J. Bacteriol. 188 , 2533-2542.
  21. Lee, J.-H. & O'Sullivan, D. J. (2006) Sequence Analysis of Two Cryptic Plasmids from Bifidobacterium longum DJO10A and Construction of a Shuttle Cloning Vector, Appl. Envir. Microbiol. 72 , 527-535.
  22. Rinke, C., et al. (2006) "Candidatus Thiobios zoothamnicoli," an Ectosymbiotic Bacterium Covering the Giant Marine Ciliate Zoothamnium niveum, Appl. Envir. Microbiol. 72 , 2014-2021.
  23. Stafforini, D. M., et al. (2006) Release of Free F2-isoprostanes from Esterified Phospholipids Is Catalyzed by Intracellular and Plasma Platelet-activating Factor Acetylhydrolases, J. Biol. Chem. 281 , 4616-4623.
  24. Thill, G., et al. (2006) ASEtrap: A biological method for speeding up the exploration of spliceomes, Genome Res. 16 , 776-786.
  25. Brodin, P., et al. (2005) Functional Analysis of Early Secreted Antigenic Target-6, the Dominant T-cell Antigen of Mycobacterium tuberculosis, Reveals Key Residues Involved in Secretion, Complex Formation, Virulence, and Immunogenicity, J. Biol. Chem. 280 , 33953-33959.
  26. Savitt, J. M., et al. (2005) Bcl-x Is Required for Proper Development of the Mouse Substantia Nigra, J. Neurosci. 25 , 6721-6728.
  27. Skinner, M. A., et al. (2005) A Human Yeast Artificial Chromosome Containing the Multiple Endocrine Neoplasia Type 2B Ret Mutation Does Not Induce Medullary Thyroid Carcinoma but Does Support the Growth of Kidneys and Partially Rescues Enteric Nervous System Development in Ret-Deficient Mice, Am. J. Pathol. 166 , 265-274.
  28. Frigeri, C., et al. (2004) The Proximal Islet-Specific Glucose-6-Phosphatase Catalytic Subunit-Related Protein Autoantigen Promoter Is Sufficient to Initiate but not Maintain Transgene Expression in Mouse Islets in Vivo, Diabetes 53 , 1754-1764.
  29. Goti, D., et al. (2004) A Mutant Ataxin-3 Putative-Cleavage Fragment in Brains of Machado-Joseph Disease Patients and Transgenic Mice Is Cytotoxic above a Critical Concentration, J. Neurosci. 24 , 10266-10279.
  30. Huhndorf, S. M., et al. (2004) Molecular systematics of the Sordariales: the order and the family Lasiosphaeriaceae redefined, Mycologia 96 , 368-387.
  31. Martinez, A., et al. (2004) Genetically Modified Bacterial Strains and Novel Bacterial Artificial Chromosome Shuttle Vectors for Constructing Environmental Libraries and Detecting Heterologous Natural Products in Multiple Expression Hosts, Appl. Envir. Microbiol. 70 , 2452-2463.
  32. Reese, A. J. & Banaszak, L. J. (2004) Specificity determinants for lipids bound to {beta}-barrel proteins, J. Lipid Res. 45 , 232-243.
  33. Gaya, E., et al. (2003) Phylogenetic study of Fulgensia and allied Caloplaca and Xanthoria species (Teloschistaceae, lichen-forming ascomycota), Am. J. Botany 90 , 1095-1103.
  34. Guzman-Davalos, L., et al. (2003) Traditional infrageneric classification of Gymnopilus is not supported by ribosomal DNA sequence data, Mycologia 95 , 1204-1214.
  35. Pillai, S. R. & Jayarao, B. M. (2002) Application of IS900 PCR for Detection of Mycobacterium avium subsp. paratuberculosis Directly from Raw Milk, J Dairy Sci 85 , 1052-1057.
  36. Sutherland, T. D., et al. (2002) Gene Cloning and Molecular Characterization of a Two-Enzyme System Catalyzing the Oxidative Detoxification of {beta}-Endosulfan, Appl. Envir. Microbiol. 68 , 6237-6245.
  37. Feurtado, J. A., et al. (2001) The cloning and characterization of {{alpha}}-galactosidase present during and following germination of tomato (Lycopersicon esculentum Mill.) seed, J. Exp. Bot. 52 , 1239-1249.
  38. Pryer, K. M., et al. (2001) rbcL data reveal two monophyletic groups of filmy ferns (Filicopsida: Hymenophyllaceae), Am. J. Botany 88 , 1118-1130.
  39. Bhattacharya, D., et al. (2000) Widespread Occurrence of Spliceosomal Introns in the rDNA Genes of Ascomycetes, Mol. Biol. Evol. 17 , 1971-1984.
  40. Ching, A. K.-K., et al. (2000) Strand bias in Ig somatic hypermutation is determined by signal sequence within the variable region, Int. Immunol. 12 , 1245-1253.
  41. Kurabayashi, A. & Ueshima, R. (2000) Complete Sequence of the Mitochondrial DNA of the Primitive Opisthobranch Gastropod Pupa strigosa: Systematic Implication of the Genome Organization, Mol. Biol. Evol. 17 , 266-277.
  42. Rutberg, S. E., et al. (2000) Activator Protein 1 Transcription Factors Are Fundamental to v-rasHa-induced Changes in Gene Expression in Neoplastic Keratinocytes, Cancer Res. 60 , 6332-6338.
  43. Adak, T., et al. (1999) Brief communication. Genetics of creamish white, an eye color mutant in Anopheles stephensi, J. Hered. 90 , 573-574.
  44. Andersson, S. (1999) Brief communication. Quantitative genetics of leaf morphology in Crepis tectorum ssp. pumila (Asteraceae), J. Hered. 90 , 556-561.
  45. Hamilton, M. B. & Fleischer, R. C. (1999) Brief communication. Cloned microsatellite repeats differ between 4-base restriction endonucleases, J. Hered. 90 , 561-563.
  46. Jin, W., et al. (1999) Brief communication. Fr1 (root fluorescence) locus is located in a segregation distortion region on linkage group K of soybean genetic map, J. Hered. 90 , 553-556.
  47. Longmire, J. L., et al. (1999) Brief communication. Low abundance of microsatellite repeats in the genome of the brown-headed cowbird (Molothrus ater), J. Hered. 90 , 574-578.
  48. Mirzaie-Nodoushan, H., et al. (1999) Brief communication. Inheritance of growth habit-related attributes in red clover (Trifolium pratense L.), J. Hered. 90 , 550-553.
  49. Murfet, I. C. & Taylor, S. A. (1999) Brief communication. Flowering gene Ppd in pea: map position and disturbed segregation of allele ppd-2, J. Hered. 90 , 548-550.
  50. Roth, G. E., et al. (1999) Structure and Regulation of the Salivary Gland Secretion Protein Gene Sgs-1 of Drosophila melanogaster, Genetics 153 , 753-762.
  51. Sanchez, V. & Carde, R. (1999) Brief communication. Isozyme patterns and their inheritance in the tachinid Compsilura concinnata, J. Hered. 90 , 568-573.
  52. Dovat, S., et al. (1998) Targeted identification of zinc finger genes expressed in rat lungs, Am J Physiol Lung Cell Mol Physiol 275 , L30-37.
  53. Redell, J. B. & Tempel, B. L. (1998) Multiple Promoter Elements Interact to Control the Transcription of the Potassium Channel Gene, KCNJ2, J. Biol. Chem. 273 , 22807-22818.
  54. Zwick, M. S., et al. (1998) Physical Mapping of the liguleless Linkage Group in Sorghum bicolor Using Rice RFLP-Selected Sorghum BACs, Genetics 148 , 1983-1992.
  55. Fink, S. P., et al. (1997) Mutagenicity in Escherichia coli of the major DNA adduct derived from the endogenous mutagen malondialdehyde, PNAS 94 , 8652-8657.
  56. Qian, X., et al. (1997) Two Distinct TATA-less Promoters Direct Tissue-specific Expression of the Rat Apo-B Editing Catalytic Polypeptide 1 Gene, J. Biol. Chem. 272 , 18060-18070.
  57. Balachandran, R., et al. (1996) An additional mechanism of growth restriction in T cell line H9 of human immunodeficiency virus type 1 isolates from asymptomatic homosexual men, J. Gen. Virol. 77 , 1083-1088.
  58. Pajor, A. M. & Sun, N. (1996) Characterization of the rabbit renal Na( )-dicarboxylate cotransporter using antifusion protein antibodies, Am J Physiol Cell Physiol 271 , C1808-1816.
  59. Sands, B. E., et al. (1995) Molecular Cloning of the Rat Intestinal Trefoil Factor Gene, J. Biol. Chem. 270 , 9353-9361.
  60. Vescio, R. A., et al. (1995) Myeloma Ig heavy chain V region sequences reveal prior antigenic selection and marked somatic mutation but no intraclonal diversity, J. Immunol. 155 , 2487-2497.
  61. Ceman, S., et al. (1994) Gene required for normal MHC class II expression and function is localized to approximately 45 kb of DNA in the class II region of the MHC, J. Immunol. 152 , 2865-2873.
  62. Clark, S. W. & Meyer, D. I. (1994) ACT3: a putative centractin homologue in S. cerevisiae is required for proper orientation of the mitotic spindle, J. Cell Biol. 127 , 129-138.
  63. Evans, M., et al. (1994) Characterization of a Streptomyces-lividans-type site-specific DNA modification system in the avermectin-producer Streptomyces avermitilis permits investigation of two novel giant linear plasmids, pSA1 and pSA2, Microbiology 140 , 1367-1371.
  64. Oh, C. K. & Metcalfe, D. D. (1994) Transcriptional regulation of the TCA3 gene in mast cells after Fc epsilon RI cross-linking, J. Immunol. 153 , 325-332.
  65. Vescio, R. A., et al. (1994) The hematopoietic stem cell antigen, CD34, is not expressed on the malignant cells in multiple myeloma, Blood 84 , 3283-3290.
  66. White, T. W., et al. (1994) Selective interactions among the multiple connexin proteins expressed in the vertebrate lens: the second extracellular domain is a determinant of compatibility between connexins, J. Cell Biol. 125 , 879-892.
  67. Woo, S.-S., et al. (1994) Construction and characterization of bacterial artificial chromosome library of Sorghum bicolor, Nucleic Acids Res. 22 , 4922-4931.
  68. Zuerner, R. L. & Stanton, T. B. (1994) Physical and genetic map of the Serpulina hyodysenteriae B78T chromosome, J. Bacteriol. 176 , 1087-1092.
  69. Malnati, M. S., et al. (1993) Presentation of cytosolic antigen by HLA-DR requires a function encoded in the class II region of the MHC, J. Immunol. 151 , 6751-6756.
  70. Ramsden, R., et al. (1993) Phenobarbital induction and tissue-specific expression of the rat CYP2B2 gene in transgenic mice, J. Biol. Chem. 268 , 21722-21726.
  71. Oakey, R. J., et al. (1992) Construction of a physical map on mouse and human chromosome 1: comparison of 13 Mb of mouse and 11 Mb of human DNA, Hum. Mol. Genet. 1 , 613-620.

If you cannot find the answer to your problem then please contact us or telephone +44 (0)1954 210 200

Technical Help

If you cannot find the answer to your problem then please contact us or telephone +44 (0)1954 210 200