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Oligo Synthesis

Oligo Synthesis : CEPs

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Ferrocene-dT-CE Phosphoramidite

Ferrocene-dT-CE Phosphoramidite

Glen Research

Catalogue No.DescriptionPack SizePriceQty
10-1576-02Ferrocene-dT-CE Phosphoramidite0.25g £818.00 Quantity Add to Order
10-1576-90Ferrocene-dT-CE Phosphoramidite100umole £359.00 Quantity Add to Order
10-1576-95Ferrocene-dT-CE Phosphoramidite50umole £195.00 Quantity Add to Order

Description

10-1576

Catalog Number: 10-1576-xx

Description: Ferrocene-dT-CE Phosphoramidite

5'-dimethoxytrityloxy-5-[N-acetyl ferrocenyl-aminohexyl)-3-acrylimido]-
2'-deoxyUridine-3'-[(2-cyanoethyl)-(N,N-diisopropyl)]-phosphoramidite
Formula: C60H73FeN6O10P M.W.: 1125.07 F.W.: 684.45

Diluent: Anhydrous Acetonitrile
Coupling: 3 minute coupling time recommended
Deprotection: Synthesize using acetyl-protected dC (10-1015-xx) and deprotect in 30% Ammonium Hydroxide/40% Methylamine 1:1 (AMA) at 65°C for 10 minutes OR Synthesize using UltraMild monomers and Cap A (Catalog Numbers: dA: 10-1601-xx, dC: 10-1015-xx, dG: 10-1621-xx, dT: 10-1030-xx, Cap Mix A (40-4210-xx/ 40-4212-xx) and deprotect in Ammonium Hydroxide for 2 hours at room temperature.
Storage: Freezer storage, -10 to -30°C, dry
Stability in Solution: 1-2 days

FERROCENE LABELLING

With an excellent stability profile, ferrocene has always attracted considerable interest for DNA labelling to generate probes for electrochemical detection. Based on our Amino-Modifier C6-dT structure, Ferrocene-dT is easily added to oligonucleotides with no disruption of regular hybridization behavior. Multiple incorporations into an oligonucleotide probe are also simply achieved. Oligonucleotides are deprotected using standard techniques. Ferrocene oligonucleotides should be stored under Argon and aqueous solutions should be degassed immediately.

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Protocols

Material Safety Data Sheet

http://www.glenresearch.com/GlenReports/GR22-22.html

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References

  1. A E Navarro, et al., Nucleic Acids Res., 2004, 32, 5310-5319
  2. H Brisset, A E Navarro, N Spinelli, C Chaix, and B Mandrand, Biotechnology Journal, 2006, 1, 95-98

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Applications & Benefits

DILUTION/COUPLING DATA

The table below shows pack size data and, for solutions, dilutions and approximate couplings based on normal priming procedures. Please link for more detailed usage information with the various synthesizers.


ABI 392/394
Cat.No. Pack
Size
Grams/
Pack
0.1M Dil.
(mL)
LV40 LV200 40nm 0.2µm 1µm 10µm
Approximate Number of Additions
10-1576-02 0.25grams .25grams 2.22 60.67 36.4 22.75 16.55 12.13 3.03
10-1576-90 100µmoles .113grams 1 20 12 7.5 5.45 4 1
10-1576-95 50µmoles .056grams .5 3.33 2 1.25 .91 .67 .17
Expedite
Cat.No. Pack
Size
Grams/
Pack
Dilution
(mL)
Molarity 50nm 0.2µm 1µm 15µm
Approximate Number of Additions
10-1576-02 0.25grams .25grams 3.32 .07 60 37.5 27.27 3.75
10-1576-90 100µmoles .113grams 1.5 .07 23.6 14.75 10.73 1.48
10-1576-95 50µmoles .056grams .75 .07 8.6 5.38 3.91 .54
Beckman
Cat.No. Pack
Size
Grams/
Pack
Dilution
(mL)
Molarity 30nm 200nm 1000nm

Approximate Number of Additions
10-1576-02 0.25grams .25grams 3.32 .07 61.6 38.5 28

10-1576-90 100µmoles .113grams 1.5 .07 25.2 15.75 11.45

10-1576-95 50µmoles .056grams .75 .07 10.2 6.38 4.64

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