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Oligo Synthesis

Oligo Synthesis : CEPs

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N6-Me-dA-CE Phosphoramidite

N6-Me-dA-CE Phosphoramidite

Glen Research

Catalogue No.DescriptionPack SizePriceQty
10-1003-02N6-Me-dA-CE Phosphoramidite 0.25g £527.00 Quantity Add to Order
10-1003-90N6-Me-dA-CE Phosphoramidite 100µmoles £168.00 Quantity Add to Order

Description

N6-Me-dA-CE Phosphoramidite

Structure

Catalog Number: 10-1003-xx

Description: N6-Me-dA-CE Phosphoramidite

5'-Dimethoxytrityl-N6-methyl-2'-deoxyAdenosine, 3'-[(2-cyanoethyl)-
(N,N-diisopropyl)]-phosphoramidite
Formula: C41H50N7O6P M.W.: 767.86 F.W.: 327.24

Diluent: Anhydrous Acetonitrile
Coupling: No changes needed from standard method recommended by synthesizer manufacturer.
Deprotection: No changes needed from standard method recommended by synthesizer manufacturer.
Storage: Refrigerated storage, maximum of 2-8°C, dry
Stability in Solution: Similar to dA,C,G,T-CE Phosphoramidites

MUTAGENESIS

Cellular polynucleotides are alkylated by endogenous components, such as S-adenosylmethionine, or after reacting with two general classes of environmental and laboratory chemicals. SN1 chemical agents include alkylnitrosourea and N-alkyl-N-nitro-N-nitrosoguanidine that react with the N7 position of guanine, N3 of adenine, O6 of guanine, O2 or O4 of pyrimidines, and the non-phosphodiester oxygen atoms of the phosphate backbone. In contrast, SN2 chemical agents such as methyl methanesulfonate and dimethyl sulfate react primarily with the N1 position of adenine (1-Methyl-2’-deoxyadenosine) and N3 of cytosine. To avoid chain branching during synthesis when using DCI as activator, N6-Me-dA is offered with acetyl protection.

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Protocols

Material Safety Data Sheet

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Applications & Benefits

EXTINCTION DATA

Item Nucleoside λMax-1 Emax-1 λMax-2 Emax-2 E260


(nm) (ml/µmole) nm (ml/µmole) (ml/µmole)
10-1003 N6-Me-dA 266 16.9

15.2

 

DILUTION/COUPLING DATA

The table below shows pack size data and, for solutions, dilutions and approximate couplings based on normal priming procedures. Please link for more detailed usage information with the various synthesizers.

ABI 392/394
Cat.No. Pack
Size
Grams/
Pack
0.1M Dil.
(mL)
LV40 LV200 40nm 0.2µm 1µm 10µm
Approximate Number of Additions
10-1003-02 0.25grams .25grams 3.26 95.33 57.2 35.75 26 19.07 4.77
10-1003-90 100µmoles .077grams 1 20 12 7.5 5.45 4 1
Expedite
Cat.No. Pack
Size
Grams/
Pack
Dilution
(mL)
Molarity 50nm 0.2µm 1µm 15µm
Approximate Number of Additions
10-1003-02 0.25grams .25grams 4.86 .07 90.8 56.75 41.27 5.68
10-1003-90 100µmoles .077grams 1.5 .07 23.6 14.75 10.73 1.48
Beckman
Cat.No. Pack
Size
Grams/
Pack
Dilution
(mL)
Molarity 30nm 200nm 1000nm

Approximate Number of Additions
10-1003-02 0.25grams .25grams 4.86 .07 92.4 57.75 42

10-1003-90 100µmoles .077grams 1.5 .07 25.2 15.75 11.45

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Related products

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